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Tubulin post-translational modifications and microtubule associated proteins in neural development and disease.
Belyaeva, Polina ; Balaštík, Martin (advisor) ; Siahaan, Valerie (referee)
Microtubules (MTs) are essential components of the cytoskeleton in all eukaryotic cells. Their function is particularly important in neurons where MTs stabilize their long processes and are responsible for the precisely regulated anterograde and retrograde, intra-axonal and intra- dendritic transport over long distances. MTs are essential also during development of the vertebrate brain and all its major steps: neurogenesis, neuronal migration and neuronal differentiation. MTs are regulated at multiple levels, but two seem to be particularly important: 1. posttranslational modifications of tubulin (PTMs) have been shown to control several MT properties as stability or MT-based transport. 2. microtubule-associated proteins (MAPs) that bind soluble MT subunits, MT lattice as well as MT ends and control MT-based transport and MT dynamics by either stabilizing, destabilizing or severing MTs. Consequently, deregulation of either tubulin PTMs or MAPs may induce severe changes in neuronal cytoskeleton. Bachelor's thesis summarizes current knowledge on how PTMs (especially polyglutamylation) and MAPs (especially microtubule cleaving proteins such as spastin) regulate MT and neuronal development and degeneration. Keywords: Microtubules, tubulin post-translational modifications, polyglutamylation,...
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Role of tau phosphorylation in formation of tau envelopes
Karhanová, Adéla ; Lánský, Zdeněk (advisor) ; Štěpánek, Luděk (referee)
Tau is an intrinsically-disordered microtubule-associated protein important for axonal development and a critical regulator of microtubule functions in axons. Tau activity is controlled by phosphorylation and its deregulation resulting in tau hyperphosphorylation and aggregation has been linked to multiple neurodegenerative disorders, collectively termed tauopathies. On microtubules, tau molecules segregate into two kinetically distinct phases, consisting of either independently diffusing molecules or interacting molecules that form cohesive "envelopes" around microtubules. Tau envelopes regulate the action of other microtubule-associated proteins, such as the motility of molecular motors, and protect microtubules against degradation by microtubule-severing enzymes. How the formation, dynamics, and function of tau envelopes are regulated, however, is unknown. Here we show that tau phosphorylation impedes the formation and functioning of protective tau envelopes. Using a combination of reconstitution experiments and live cell imaging, we show that phosphorylated tau incorporates into tau envelopes and that it slows down the envelope growth. Importantly, we demonstrate that phosphorylated tau also destabilizes already existing envelopes leading to their disassembly. Together, our results demonstrate...
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Microtubule-associated proteins in plants
Benáková, Martina ; Krtková, Jana (advisor) ; Vinopal, Stanislav (referee)
1. Abstract and key words MTs are one of the basic cellular protein structure. Their features and function are influenced and modified by group of other proteins, i.e. microtubule-associated proteins (MAPs). In the last decades, an extensive research on MAPs and their wide range of functions has been carried out. Therefore we are aware of the involvement of some of the MAPs in MT dynamics, other have been shown to have rather structural function. They bundle MTs with various cell structures, such as the other MTs, proteins, organelles, actin cytoskeleton or plasma membrane. Many described MAPs are homologous in the whole eukaryotic domain, for example MAP65 or EB1 (END BINDING 1) family, therefore it is interesting to follow if and how the functions of plant MAPs differ from their animal counterparts. On the other hand, there are many specific MAPs with unique functions in plants, e.g. ATK5 or SPR1 (SPIRAL 1). This Bachelor thesis is a survey on current knowledge of plant MAPs and it makes an effort to present their characteristic and functions in plant cell and organism. Key words: cytoskeleton, microtubules, microtubule-associated proteins, plant cell, growth and development
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MAP code and regulation of microtubule-based processes
Karhanová, Adéla ; Lánský, Zdeněk (advisor) ; Tomášová, Štěpánka (referee)
Microtubule associated proteins (MAPs) are considered as key regulators of molecular trafficking in cells. Even though their malfunctioning results in severe pathologies, such as neurodegenerative disorders, the regulatory roles of these proteins remain under debate. Since MAPs bind to the cytoskeleton, this structure has to be vital for the function of MAPs. Microtubules, a highly dynamic type of cytoskeletal structure, have been given extra attention due to their association with cell division and vital functions in neurons. Microtubules can undergo post-translational modifications that affect molecular motors as well as binding of other proteins, such as MAPs. Whether post-translational modifications of microtubules regulate the distribution of MAPs is so far not sufficiently documented. However, MAPs have been shown to cooperatively form cohesive envelopes on the microtubules and thereby regulate the access of motors and severing enzymes. As there are many types of MAPs and they are mutually exclusive, a hypothesis of a regulatory 'MAP code' emerged recently in the literature. Using available literature, this review will try to introduce the new model of MAP code and provide some background information on previous research on this topic.
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Microtubule inner proteins
Bočan, Václav ; Libusová, Lenka (advisor) ; Sulimenko, Vadym (referee)
Microtubules are a prominent part of the cytoskeletal network in eukaryotic cells. They are involved in nearly all cellular processes, e.g. in vesicular trafficking, signal transduction, locomotion, or cell morphogenesis. To discharge that many functions, precise regulation of microtubule dynamics and architecture is essential. Such regulation is maintained by various microtubule-associated proteins, which usually bind from the outside. However, several proteins were found to bind in the lumen of microtubules. These microtubule inner proteins were shown to function either as post-translational modifiers of tubulin or stabilizers in time- persistent microtubular structures. A few inner proteins were identified, but our understanding of their attributes is still incomplete. This thesis summarizes current knowledge of microtubule inner proteins. The scope is focused on their enzymatic and structural features. Tubulin acetyltransferase represents the enzymatic MIPs. Possible ways of lumen entry and impact on the tubulin lattice are described. Next, the structural roles of proteins inside microtubules, most prominent in the axoneme, are outlined. The relevance of microtubule inner proteins for cytoskeletal functions, flagellar motility, and future perspectives are discussed at the end.
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Microtubule-associated proteins in plants
Benáková, Martina ; Krtková, Jana (advisor) ; Vinopal, Stanislav (referee)
1. Abstract and key words MTs are one of the basic cellular protein structure. Their features and function are influenced and modified by group of other proteins, i.e. microtubule-associated proteins (MAPs). In the last decades, an extensive research on MAPs and their wide range of functions has been carried out. Therefore we are aware of the involvement of some of the MAPs in MT dynamics, other have been shown to have rather structural function. They bundle MTs with various cell structures, such as the other MTs, proteins, organelles, actin cytoskeleton or plasma membrane. Many described MAPs are homologous in the whole eukaryotic domain, for example MAP65 or EB1 (END BINDING 1) family, therefore it is interesting to follow if and how the functions of plant MAPs differ from their animal counterparts. On the other hand, there are many specific MAPs with unique functions in plants, e.g. ATK5 or SPR1 (SPIRAL 1). This Bachelor thesis is a survey on current knowledge of plant MAPs and it makes an effort to present their characteristic and functions in plant cell and organism. Key words: cytoskeleton, microtubules, microtubule-associated proteins, plant cell, growth and development
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